STRINGSTRING
XP_008437253.1 protein (Cucumis melo) - STRING interaction network
"XP_008437253.1" - Probable copper-transporting ATPase HMA5 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437253.1Probable copper-transporting ATPase HMA5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (973 aa)    
Predicted Functional Partners:
XP_008446769.1
Copper transport protein CCH-like (95 aa)
       
 
  0.715
XP_008445546.1
Copper transporter 5.1 (142 aa)
     
 
  0.649
XP_008460041.1
Metal tolerance protein 1-like isoform X1 (420 aa)
   
   
  0.647
XP_008438084.1
Cell division protein FtsY homolog, chloroplastic isoform X1 (416 aa)
         
  0.617
XP_008453757.1
Probable GPI-anchored adhesin-like protein PGA55 isoform X1 (893 aa)
           
  0.607
XP_008448941.1
Copper chaperone for superoxide dismutase, chloroplastic/cytosolic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (328 aa)
     
 
  0.601
XP_008445134.1
Cation-chloride cotransporter 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (981 aa)
         
  0.593
XP_008441444.1
Auxin transporter-like protein 1 (474 aa)
           
  0.584
XP_008453012.1
Protein NRT1/ PTR FAMILY 4.5-like (608 aa)
           
  0.569
XP_008463335.1
Protein argonaute PNH1-like; Belongs to the argonaute family (926 aa)
           
  0.568
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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