STRINGSTRING
XP_008437257.1 protein (Cucumis melo) - STRING interaction network
"XP_008437257.1" - Putative pre-16S rRNA nuclease isoform X1 in Cucumis melo
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
XP_008437257.1Putative pre-16S rRNA nuclease isoform X1; Uncharacterized protein LOC103482742 isoform X1 (169 aa)    
Predicted Functional Partners:
XP_008466789.1
Putative methyltransferase NSUN6 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (611 aa)
   
   
  0.683
XP_008440576.1
tRNA (cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (836 aa)
   
   
  0.647
XP_008463429.1
RNA helicase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (734 aa)
         
  0.636
XP_008455218.1
Uncharacterized CRM domain-containing protein At3g25440, chloroplastic (345 aa)
           
  0.631
XP_008451368.1
Pentatricopeptide repeat-containing protein At4g02820, mitochondrial (531 aa)
           
  0.631
XP_008444732.1
Putative pentatricopeptide repeat-containing protein At5g59900 (717 aa)
           
  0.631
XP_008458258.1
DNA mismatch repair protein MSH7 (1094 aa)
         
  0.621
XP_008452911.1
tRNA pseudouridine synthase A, mitochondrial-like (519 aa)
   
   
  0.619
XP_008450003.1
Ribonucleoside-diphosphate reductase small chain (329 aa)
   
   
  0.615
XP_008441161.1
Uncharacterized protein LOC103485383 isoform X1 (365 aa)
   
   
  0.615
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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