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XP_008437260.1 protein (Cucumis melo) - STRING interaction network
"XP_008437260.1" - Lysine-specific demethylase 5A isoform X1 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XP_008437260.1Lysine-specific demethylase 5A isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 mRNAs, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (1851 aa)    
Predicted Functional Partners:
XP_008438277.1
ATP synthase subunit delta’, mitochondrial (200 aa)
   
 
  0.890
XP_008446913.1
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] (168 aa)
     
 
  0.823
XP_008453787.1
Cytochrome c oxidase assembly protein COX11, mitochondrial isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (337 aa)
     
   
  0.683
XP_008440173.1
Histone-lysine N-methyltransferase SUVR5 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (1493 aa)
     
 
  0.674
XP_008450408.1
Protein TRAUCO; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (433 aa)
     
 
  0.624
XP_008462225.1
ATP synthase subunit epsilon, mitochondrial (70 aa)
     
 
  0.611
XP_008463415.1
The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 2 bases in 1 codon (350 aa)
   
 
  0.598
XP_008449787.1
ATP synthase subunit gamma, mitochondrial (322 aa)
   
 
  0.598
XP_008441056.1
ATP synthase gamma chain, chloroplastic (373 aa)
   
 
  0.598
XP_008439983.1
ATP synthase gamma chain, chloroplastic (371 aa)
   
 
  0.598
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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