STRINGSTRING
XP_008437273.1 protein (Cucumis melo) - STRING interaction network
"XP_008437273.1" - Uncharacterized protein LOC103482746 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437273.1Uncharacterized protein LOC103482746 (339 aa)    
Predicted Functional Partners:
XP_008452604.1
Probable isoaspartyl peptidase/L-asparaginase 2 (322 aa)
           
  0.704
XP_008453609.1
Uncharacterized protein LOC103494271 (120 aa)
           
  0.630
XP_008454067.1
Uncharacterized protein LOC103494594 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (468 aa)
           
  0.627
XP_008442576.1
Uncharacterized protein LOC103486409 isoform X1 (244 aa)
           
  0.627
XP_008441919.1
Uncharacterized protein LOC103485914 (268 aa)
           
  0.627
XP_008441251.1
UPF0400 protein C337.03 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (528 aa)
           
  0.627
XP_008438665.1
Uncharacterized protein LOC103483705 isoform X1 (494 aa)
           
  0.627
XP_008437823.1
Uncharacterized protein LOC103483139 (480 aa)
           
  0.627
XP_008464006.1
Uncharacterized protein LOC103501996 isoform X1 (850 aa)
           
  0.615
XP_008442533.1
Uncharacterized protein LOC103486380 (251 aa)
           
  0.595
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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