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XP_008437283.1 protein (Cucumis melo) - STRING interaction network
"XP_008437283.1" - tyrosine--tRNA ligase 1, cytoplasmic in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
XP_008437283.1tyrosine--tRNA ligase 1, cytoplasmic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns; Belongs to the class-I aminoacyl-tRNA synthetase family (387 aa)    
Predicted Functional Partners:
XP_008457156.1
methionine--tRNA ligase, cytoplasmic; Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (804 aa)
 
 
  0.992
XP_008453992.1
LOW QUALITY PROTEIN- isoleucine--tRNA ligase, cytoplasmic-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; Belongs to the class-I aminoacyl-tRNA synthetase family (1184 aa)
   
 
  0.976
XP_008448735.1
phenylalanine--tRNA ligase alpha subunit, cytoplasmic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (492 aa)
   
   
  0.971
XP_008450384.1
glycine--tRNA ligase 1, mitochondrial (729 aa)
   
   
  0.964
XP_008460942.1
glutamine--tRNA ligase-like; Belongs to the class-I aminoacyl-tRNA synthetase family (794 aa)
   
   
  0.964
XP_008457733.1
glutamine--tRNA ligase-like isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family (796 aa)
   
   
  0.964
XP_008466439.1
cysteine--tRNA ligase, cytoplasmic isoform X1 (576 aa)
   
 
  0.960
XP_008465226.1
LOW QUALITY PROTEIN- cysteine--tRNA ligase 2, cytoplasmic-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (557 aa)
   
 
  0.960
XP_008452422.1
tryptophan--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family (405 aa)
 
   
  0.960
XP_008453844.1
Probable tyrosine--tRNA ligase, mitochondrial (493 aa)
     
  0.956
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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