STRINGSTRING
XP_008437380.1 protein (Cucumis melo) - STRING interaction network
"XP_008437380.1" - Probable GABA transporter 2 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437380.1Probable GABA transporter 2 (449 aa)    
Predicted Functional Partners:
XP_008454195.1
Cell cycle checkpoint control protein RAD9A isoform X1 (455 aa)
           
  0.587
XP_008439304.1
Delta(1)-pyrroline-2-carboxylate reductase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (412 aa)
           
  0.575
XP_008457762.1
Protein kinase PINOID 2 (507 aa)
           
  0.555
XP_008450611.1
Translationally-controlled tumor protein homolog; Belongs to the TCTP family (168 aa)
           
  0.483
TCTP
Translationally-controlled tumor protein homolog; Involved in calcium binding and microtubule stabilization (168 aa)
           
  0.483
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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