STRINGSTRING
XP_008437386.1 protein (Cucumis melo) - STRING interaction network
"XP_008437386.1" - Probable polygalacturonase in Cucumis melo
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437386.1Probable polygalacturonase (445 aa)    
Predicted Functional Partners:
XP_008465167.1
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (296 aa)
     
   
  0.651
XP_008439237.1
Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (397 aa)
     
   
  0.637
XP_008437714.1
Probable pectinesterase 68 (363 aa)
     
   
  0.621
XP_008442110.1
Rhomboid-like protein 14, mitochondrial; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (314 aa)
           
  0.610
XP_008438707.1
3-dehydrosphinganine reductase TSC10A isoform X1; 3-ketodihydrosphingosine reductase (324 aa)
           
  0.610
XP_008465726.1
Serine/threonine-protein kinase STN7, chloroplastic isoform X1 (580 aa)
           
  0.583
XP_008462177.1
Aquaporin TIP2-1; Belongs to the MIP/aquaporin (TC 1.A.8) family (248 aa)
     
   
  0.574
XP_008445351.1
Probable beta-D-xylosidase 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (783 aa)
     
   
  0.552
XP_008451860.1
Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (401 aa)
     
   
  0.505
XP_008460449.1
Polygalacturonase-like (284 aa)
   
     
  0.464
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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