STRINGSTRING
XP_008437412.1 protein (Cucumis melo) - STRING interaction network
"XP_008437412.1" - SUN domain-containing protein 2 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
XP_008437412.1SUN domain-containing protein 2 isoform X1 (628 aa)    
Predicted Functional Partners:
XP_008447820.1
Protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (641 aa)
     
      0.711
XP_008456648.1
SUN domain-containing protein 2 (470 aa)
       
 
  0.661
XP_008462162.1
Vacuolar protein sorting-associated protein 41 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (960 aa)
       
 
  0.630
XP_008465445.1
Protein VACUOLELESS1 (844 aa)
       
      0.630
XP_008464170.1
Vacuolar protein-sorting-associated protein 11 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (958 aa)
       
      0.630
XP_008455352.1
LOW QUALITY PROTEIN- vacuolar protein sorting-associated protein 18 homolog; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (989 aa)
       
      0.630
XP_008439127.1
Uncharacterized protein LOC103484017 (440 aa)
           
  0.586
XP_008458975.1
Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (314 aa)
           
  0.581
XP_008439460.1
Histone acetyltransferase GCN5 (561 aa)
     
   
  0.572
XP_008451188.1
glutamate--tRNA ligase, chloroplastic/mitochondrial; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns; Belongs to the class-I aminoacyl-tRNA synthetase family (574 aa)
           
  0.561
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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