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XP_008437415.1 protein (Cucumis melo) - STRING interaction network
"XP_008437415.1" - Uncharacterized protein LOC103482834 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437415.1Uncharacterized protein LOC103482834; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (233 aa)    
Predicted Functional Partners:
XP_008463763.1
Transcription factor TGA5 (235 aa)
           
  0.716
XP_008444243.1
Uncharacterized protein LOC103487632 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (269 aa)
           
  0.703
XP_008441766.1
Phospholipase A(1) LCAT3 (449 aa)
           
  0.619
XP_008464836.1
Serine/threonine-protein kinase CDL1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (383 aa)
           
  0.597
XP_008452968.1
Serine/threonine-protein kinase CDL1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (385 aa)
           
  0.597
XP_008446305.1
Allantoate deiminase (538 aa)
           
  0.569
XP_008456285.1
Succinate-semialdehyde dehydrogenase, mitochondrial (541 aa)
           
  0.422
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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