STRINGSTRING
XP_008437437.1 protein (Cucumis melo) - STRING interaction network
"XP_008437437.1" - LOW QUALITY PROTEIN: oligopeptide transporter 7 in Cucumis melo
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437437.1LOW QUALITY PROTEIN- oligopeptide transporter 7; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 2 bases in 1 codon (752 aa)    
Predicted Functional Partners:
XP_008451182.1
Cellulose synthase-like protein D4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (1122 aa)
           
  0.629
XP_008462624.1
Syntaxin-121; Belongs to the syntaxin family (304 aa)
           
  0.626
XP_008442928.1
Syntaxin-121; Belongs to the syntaxin family (307 aa)
           
  0.626
XP_008456512.1
Vacuolar amino acid transporter 1-like (554 aa)
       
 
  0.610
XP_008446843.1
Vacuolar amino acid transporter 1-like isoform X1 (583 aa)
       
 
  0.610
XP_008448151.1
Chloride channel protein CLC-e isoform X1 (797 aa)
       
 
  0.576
XP_008457165.1
Chloride channel protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (773 aa)
       
 
  0.564
XP_008450132.1
Probable metal-nicotianamine transporter YSL6; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (676 aa)
     
   
  0.560
XP_008449563.1
Chloride channel protein CLC-d (797 aa)
       
 
  0.423
XP_008463203.1
LIM domain-containing protein WLIM2b-like; Pollen-specific protein SF3-like (195 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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