STRINGSTRING
XP_008437447.1 protein (Cucumis melo) - STRING interaction network
"XP_008437447.1" - Uncharacterized protein LOC103482863 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437447.1Uncharacterized protein LOC103482863 (473 aa)    
Predicted Functional Partners:
XP_008445442.1
Cytochrome B5 isoform D (131 aa)
           
  0.703
XP_008459243.1
Long chain acyl-CoA synthetase 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (661 aa)
   
 
  0.654
XP_008458811.1
Cytochrome B5-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns; Belongs to the cytochrome b5 family (115 aa)
           
  0.595
XP_008437642.1
Cytochrome b5 isoform A (134 aa)
           
  0.576
XP_008448004.1
U-box domain-containing protein 35-like (790 aa)
       
 
  0.560
XP_008439532.1
Dihydroceramide fatty acyl 2-hydroxylase FAH2-like; Fatty acid 2-hydroxylase 2-like; Belongs to the sterol desaturase family (237 aa)
           
  0.429
XP_008439531.1
Dihydroceramide fatty acyl 2-hydroxylase FAH1-like; Fatty acid 2-hydroxylase 1-like; Belongs to the sterol desaturase family (237 aa)
           
  0.429
XP_008466408.1
Ethylene-responsive transcription factor SHINE 2-like (189 aa)
           
  0.420
XP_008465053.1
Cytochrome b5, seed isoform-like (133 aa)
           
  0.420
XP_008457249.1
Cytochrome b5 isoform B-like (134 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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