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XP_008437462.1 protein (Cucumis melo) - STRING interaction network
"XP_008437462.1" - 50S ribosomal protein L11, chloroplastic in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437462.150S ribosomal protein L11, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL11 family (234 aa)    
Predicted Functional Partners:
XP_008441337.1
50S ribosomal protein L27, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (183 aa)
   
 
  0.991
XP_008464053.1
50S ribosomal protein L4, chloroplastic isoform X1 (297 aa)
 
 
  0.991
XP_008463780.1
50S ribosomal protein L13, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL13 family (248 aa)
 
 
  0.990
XP_008448785.1
50S ribosomal protein L19, chloroplastic (221 aa)
 
 
  0.990
XP_008463369.1
50S ribosomal protein L9, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (198 aa)
   
 
  0.990
XP_008466625.1
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family (204 aa)
 
 
  0.988
XP_008442307.1
50S ribosomal protein L17, chloroplastic; Belongs to the bacterial ribosomal protein bL17 family (208 aa)
   
 
  0.987
XP_008452322.1
50S ribosomal protein L24, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL24 family (191 aa)
   
 
  0.986
XP_008455431.1
50S ribosomal protein L6, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL6 family (233 aa)
 
 
  0.986
XP_008462962.1
30S ribosomal protein S10, chloroplastic (269 aa)
 
 
  0.985
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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