STRINGSTRING
XP_008437465.1 protein (Cucumis melo) - STRING interaction network
"XP_008437465.1" - The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437465.1The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (362 aa)    
Predicted Functional Partners:
XP_008460405.1
Pentatricopeptide repeat-containing protein At3g25210, mitochondrial (395 aa)
           
  0.630
XP_008453737.1
Cytochrome P450 90B1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (487 aa)
           
  0.630
XP_008449192.1
LOW QUALITY PROTEIN- H/ACA ribonucleoprotein complex subunit 4; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (567 aa)
           
  0.630
XP_008442309.1
Protein LURP-one-related 8 (199 aa)
           
  0.630
XP_008449417.1
Vacuolar iron transporter homolog 2.1-like (196 aa)
           
  0.593
XP_008445234.1
Adenine phosphoribosyltransferase 2-like (191 aa)
           
  0.583
XP_008448624.1
Extra-large guanine nucleotide-binding protein 3 (864 aa)
           
  0.547
XP_008444133.1
Extra-large guanine nucleotide-binding protein 3-like isoform X1 (878 aa)
           
  0.547
XP_008440199.1
Extra-large guanine nucleotide-binding protein 1 isoform X1 (967 aa)
           
  0.547
XP_008451867.1
Uncharacterized protein LOC103493027 (180 aa)
           
  0.482
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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