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XP_008437487.1 protein (Cucumis melo) - STRING interaction network
"XP_008437487.1" - Probable methyltransferase PMT18 in Cucumis melo
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437487.1Probable methyltransferase PMT18; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (636 aa)    
Predicted Functional Partners:
XP_008462895.1
Uncharacterized protein LOC103501168 isoform X1 (838 aa)
           
  0.725
XP_008458536.1
BI1-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 16 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns; Belongs to the BI1 family (244 aa)
           
  0.725
XP_008438755.1
Pyruvate, phosphate dikinase, chloroplastic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (962 aa)
           
  0.725
XP_008451076.1
Protein ROOT PRIMORDIUM DEFECTIVE 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (398 aa)
           
  0.724
XP_008438188.1
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (402 aa)
           
  0.724
XP_008462001.1
Probable chromatin-remodeling complex ATPase chain (87 aa)
           
  0.627
XP_008458481.1
Putative chromatin-remodeling complex ATPase chain isoform X1 (1073 aa)
           
  0.627
XP_008458386.1
Importin subunit alpha; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns; Belongs to the importin alpha family (530 aa)
           
  0.627
XP_008453860.1
Importin subunit alpha-1; Belongs to the importin alpha family (529 aa)
           
  0.627
XP_008445188.1
UPF0481 protein At3g47200-like (488 aa)
           
  0.627
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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