STRINGSTRING
XP_008437489.1 protein (Cucumis melo) - STRING interaction network
"XP_008437489.1" - Transmembrane protein 120 homolog in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437489.1Transmembrane protein 120 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (364 aa)    
Predicted Functional Partners:
XP_008465096.1
Transmembrane protein 53; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (445 aa)
           
  0.526
XP_008456111.1
Uncharacterized protein LOC103496148 (409 aa)
           
  0.526
XP_008452531.1
Uncharacterized protein LOC103493530 (408 aa)
           
  0.526
XP_008440723.1
Transmembrane protein 53 (403 aa)
           
  0.526
XP_008465676.1
Rhomboid-like protein 19; Transmembrane protein 115 (308 aa)
           
  0.489
XP_008459843.1
Uncharacterized protein LOC103498843 (189 aa)
       
      0.431
XP_008454012.1
Uncharacterized protein LOC103494562 (189 aa)
       
      0.431
XP_008456291.1
ALA-interacting subunit 3-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (343 aa)
           
  0.418
XP_008456197.1
ALA-interacting subunit 5-like (356 aa)
           
  0.418
XP_008439601.1
Putative ALA-interacting subunit 2 isoform X1 (381 aa)
           
  0.418
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (9%) [HD]