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XP_008437492.1 protein (Cucumis melo) - STRING interaction network
"XP_008437492.1" - Trihelix transcription factor GTL1-like isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437492.1Trihelix transcription factor GTL1-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (578 aa)    
Predicted Functional Partners:
XP_008447369.1
Subtilisin-like protease SDD1 (768 aa)
           
  0.627
XP_008442432.1
Putative serine/threonine-protein kinase isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (388 aa)
       
 
  0.572
XP_008442328.1
Putative serine/threonine-protein kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (371 aa)
       
 
  0.572
XP_008451911.1
Trihelix transcription factor GT-3b-like (279 aa)
           
  0.568
XP_008441519.1
LOW QUALITY PROTEIN- uncharacterized protein LOC103485620; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (449 aa)
           
  0.568
XP_008442786.1
Uncharacterized protein LOC103486561 (538 aa)
           
  0.554
XP_008466281.1
Trihelix transcription factor ASR3; Uncharacterized protein LOC103503736 isoform X1 (311 aa)
           
  0.528
XP_008465807.1
Histone-lysine N-methyltransferase ASHR1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (524 aa)
           
  0.495
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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