STRINGSTRING
XP_008437495.1 protein (Cucumis melo) - STRING interaction network
"XP_008437495.1" - Probable receptor-like protein kinase At1g33260 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437495.1Probable receptor-like protein kinase At1g33260; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (354 aa)    
Predicted Functional Partners:
XP_008441103.1
Mitogen-activated protein kinase kinase kinase 2-like (463 aa)
   
      0.434
XP_008455530.1
Mitogen-activated protein kinase kinase kinase A-like (371 aa)
   
      0.428
XP_008461430.1
Mitogen-activated protein kinase kinase kinase 2-like (335 aa)
   
      0.427
XP_008461431.1
Mitogen-activated protein kinase kinase kinase 2-like (336 aa)
   
      0.422
XP_008457763.1
Mitogen-activated protein kinase kinase kinase 1-like (346 aa)
   
      0.419
XP_008451652.1
Serine/threonine-protein kinase grp-like (289 aa)
   
      0.404
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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