STRINGSTRING
XP_008437504.1 protein (Cucumis melo) - STRING interaction network
"XP_008437504.1" - Protein DYAD in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437504.1Protein DYAD; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments (751 aa)    
Predicted Functional Partners:
XP_008438110.1
RNA polymerase I termination factor; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (533 aa)
     
        0.863
XP_008451878.1
Probable apyrase 7; Belongs to the GDA1/CD39 NTPase family (756 aa)
     
        0.861
XP_008465268.1
Pentatricopeptide repeat-containing protein At2g30100, chloroplastic (501 aa)
     
        0.685
XP_008441822.1
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
        0.626
XP_008454870.1
Sister chromatid cohesion 1 protein 1 (616 aa)
           
  0.613
XP_008466007.1
Homeobox-leucine zipper protein HDG5 (813 aa)
           
  0.611
XP_008442113.1
Anaphase-promoting complex subunit 6 isoform X1 (547 aa)
           
  0.583
XP_008439976.1
Uncharacterized protein LOC103484600 (182 aa)
           
  0.583
XP_008463649.1
Uncharacterized protein LOC103501744 (146 aa)
           
  0.580
XP_008459468.1
Diacylglycerol O-acyltransferase 1 (533 aa)
     
        0.576
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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