STRINGSTRING
XP_008437512.1 protein (Cucumis melo) - STRING interaction network
"XP_008437512.1" - SKP1-like protein 21 isoform X1 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437512.1SKP1-like protein 21 isoform X1; Belongs to the SKP1 family (370 aa)    
Predicted Functional Partners:
XP_008439299.1
Protein SGT1 homolog (357 aa)
     
 
  0.920
XP_008459863.1
RING-box protein 1a-like isoform X1 (117 aa)
     
 
  0.865
XP_008450927.1
RING-box protein 1a (117 aa)
     
 
  0.865
XP_008464976.1
Zinc finger CCCH domain-containing protein 48-like (432 aa)
       
 
  0.850
XP_008449867.1
F-box/WD-40 repeat-containing protein At5g21040; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (553 aa)
       
 
  0.850
XP_008444161.1
F-box protein 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (327 aa)
       
 
  0.847
XP_008457496.1
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family (167 aa)
     
 
  0.837
XP_008458472.1
Cullin-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 11 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns; Belongs to the cullin family (744 aa)
     
 
  0.816
XP_008443419.1
cullin-3A-like; Belongs to the cullin family (733 aa)
     
 
  0.816
XP_008438859.1
Cullin-1-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns; Belongs to the cullin family (770 aa)
     
 
  0.816
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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