STRINGSTRING
XP_008437517.1 protein (Cucumis melo) - STRING interaction network
"XP_008437517.1" - Protein TRANSPARENT TESTA 12-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437517.1Protein TRANSPARENT TESTA 12-like (99 aa)    
Predicted Functional Partners:
XP_008456697.1
Uncharacterized protein At3g03773-like isoform X1 (190 aa)
           
  0.625
XP_008467141.1
Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial; Probable 1-aminocyclopropane-1-carboxylate deaminase (456 aa)
           
  0.604
XP_008452519.1
Probable inactive heme oxygenase 2, chloroplastic (329 aa)
           
  0.422
XP_008451761.1
Uncharacterized protein LOC103492948 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (561 aa)
           
  0.420
XP_008460184.1
Uncharacterized protein LOC103499070 (281 aa)
           
  0.420
XP_008458127.1
Squamosa promoter-binding-like protein 8 (297 aa)
           
  0.420
XP_008444968.1
MATE efflux family protein 5; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (590 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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