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XP_008437553.1 protein (Cucumis melo) - STRING interaction network
"XP_008437553.1" - Uncharacterized protein LOC103482932 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437553.1Uncharacterized protein LOC103482932; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (350 aa)    
Predicted Functional Partners:
XP_008457752.1
Uncharacterized protein LOC103497369; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (344 aa)
     
   
  0.852
XP_008466932.1
Riboflavin synthase (248 aa)
         
  0.822
XP_008438678.1
Preprotein translocase subunit SECE1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (180 aa)
     
   
  0.732
XP_008442829.1
CAAX prenyl protease 2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (313 aa)
       
 
  0.729
XP_008451986.1
Protein translocase subunit SECA2, chloroplastic isoform X1; Belongs to the SecA family (1057 aa)
   
   
  0.655
XP_008442373.1
Protein TIC 56, chloroplastic; Uncharacterized protein LOC103486261 (512 aa)
           
  0.614
XP_008463392.1
Uncharacterized protein LOC103501560 (471 aa)
           
  0.602
XP_008455028.1
QWRF motif-containing protein 2 (671 aa)
           
  0.595
XP_008442772.1
Cactin (683 aa)
           
  0.590
XP_008449410.1
Phosphatidylinositol 4-phosphate 5-kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (780 aa)
           
  0.589
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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