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XP_008437571.1 protein (Cucumis melo) - STRING interaction network
"XP_008437571.1" - Uncharacterized protein LOC103482943 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437571.1Uncharacterized protein LOC103482943; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (873 aa)    
Predicted Functional Partners:
XP_008441819.1
Splicing factor 3B subunit 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments (599 aa)
     
   
  0.691
XP_008464405.1
SWI/SNF complex subunit SWI3A; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 2 bases in 1 codon (565 aa)
     
      0.655
XP_008453025.1
SWI/SNF complex subunit SWI3B (560 aa)
     
      0.655
XP_008447039.1
SWI/SNF complex subunit SWI3D (1026 aa)
     
      0.655
XP_008444192.1
SWI/SNF complex subunit SWI3C; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (815 aa)
     
      0.655
XP_008446768.1
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids (424 aa)
           
  0.441
XP_008467085.1
Extensin-2-like (391 aa)
           
  0.420
XP_008453935.1
Extensin-2 (299 aa)
           
  0.420
XP_008459852.1
Probable DNA primase large subunit (452 aa)
           
  0.418
XP_008453322.1
WD repeat and HMG-box DNA-binding protein 1 isoform X1 (963 aa)
           
  0.418
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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