STRINGSTRING
XP_008437579.1 protein (Cucumis melo) - STRING interaction network
"XP_008437579.1" - LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437579.1LOW QUALITY PROTEIN- polypyrimidine tract-binding protein homolog 2; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (750 aa)    
Predicted Functional Partners:
XP_008442769.1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (639 aa)
       
 
  0.869
XP_008456718.1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (651 aa)
       
 
  0.866
XP_008455010.1
TIP41-like protein (330 aa)
           
  0.854
XP_008456142.1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (654 aa)
       
 
  0.833
XP_008454965.1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (649 aa)
       
 
  0.833
XP_008462534.1
Protein SAND (626 aa)
           
  0.721
XP_008459362.1
Uncharacterized protein LOC103498519 (447 aa)
           
  0.707
XP_008461195.1
LOW QUALITY PROTEIN- cell division cycle 5-like protein; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (1025 aa)
     
      0.706
XP_008453669.1
LOW QUALITY PROTEIN- cell division cycle 5-like protein; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1018 aa)
     
      0.706
XP_008445324.1
UTP--glucose-1-phosphate uridylyltransferase-like isoform X1 (638 aa)
     
 
  0.696
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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