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XP_008437589.1 protein (Cucumis melo) - STRING interaction network
"XP_008437589.1" - Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437589.1Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 16 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (111 aa)    
Predicted Functional Partners:
XP_008458759.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (646 aa)
       
 
  0.818
XP_008453738.1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (635 aa)
       
 
  0.818
XP_008456107.1
Uncharacterized protein LOC103496144 (79 aa)
     
   
  0.696
XP_008459591.1
Succinate dehydrogenase assembly factor 1 homolog, mitochondrial; Belongs to the complex I LYR family (87 aa)
           
  0.696
XP_008439036.1
Protein RALF-like 32 (120 aa)
           
  0.693
XP_008438316.1
Protein RALF-like 24 (128 aa)
           
  0.693
XP_008458082.1
Uncharacterized protein LOC103497616 (61 aa)
           
  0.692
XP_008438539.1
Electron transfer flavoprotein subunit beta, mitochondrial (251 aa)
     
   
  0.632
XP_008460070.1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like (171 aa)
     
   
  0.631
XP_008439905.1
Ctenidin-3-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 25 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (133 aa)
           
  0.631
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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