STRINGSTRING
XP_008437621.1 protein (Cucumis melo) - STRING interaction network
"XP_008437621.1" - Molybdate-anion transporter in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437621.1Molybdate-anion transporter (460 aa)    
Predicted Functional Partners:
XP_008460424.1
Probable methyltransferase PMT21 (602 aa)
     
        0.860
XP_008445955.1
Protein ZINC INDUCED FACILITATOR-LIKE 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (490 aa)
           
  0.587
XP_008451304.1
Sulfate transporter 3.1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (322 aa)
           
  0.582
XP_008455613.1
UNC93-like protein 1 (458 aa)
     
   
  0.567
XP_008455612.1
UNC93-like protein 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (463 aa)
     
   
  0.567
XP_008456184.1
Organic cation/carnitine transporter 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (502 aa)
           
  0.544
XP_008460157.1
LOW QUALITY PROTEIN- SPX domain-containing membrane protein At4g22990-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (694 aa)
           
  0.459
XP_008437199.1
SPX domain-containing membrane protein At4g22990-like (696 aa)
           
  0.459
XP_008467005.1
Probable prefoldin subunit 5 (91 aa)
           
  0.449
XP_008437670.1
Uncharacterized protein LOC103483010; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments (181 aa)
           
  0.449
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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