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XP_008437628.1 protein (Cucumis melo) - STRING interaction network
"XP_008437628.1" - Uncharacterized protein LOC103482980 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437628.1Uncharacterized protein LOC103482980; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (304 aa)    
Predicted Functional Partners:
XP_008451564.1
Blue-light photoreceptor PHR2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (451 aa)
           
  0.820
SUT4
Sucrose transport protein SUC4 isoform X1 (526 aa)
           
  0.590
USP
UDP-sugar pyrophosphorylase; May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars. Can convert galactose- 1-phosphate into glucose-1-phosphate by carrying out both the Gal- 1-P conversion to UDP-Gal and, following an epimerase step, the subsequent reverse reaction of UDP-Glc to Glc-1-P (716 aa)
           
  0.572
XP_008441563.1
Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane (252 aa)
           
  0.571
XP_008450689.1
Sugar transporter ERD6-like 5 isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (479 aa)
           
  0.555
XP_008466077.1
tryptophan--tRNA ligase, chloroplastic/mitochondrial; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns; Belongs to the class-I aminoacyl-tRNA synthetase family (414 aa)
           
  0.548
XP_008446816.1
Pullulanase 1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (966 aa)
           
  0.545
XP_008452543.1
Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (968 aa)
           
  0.420
XP_008444624.1
Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like (732 aa)
           
  0.420
XP_008465743.1
Sucrose transport protein SUC3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (606 aa)
           
  0.406
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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