STRINGSTRING
XP_008437637.1 protein (Cucumis melo) - STRING interaction network
"XP_008437637.1" - Uncharacterized protein LOC103482984 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437637.1Uncharacterized protein LOC103482984; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (120 aa)    
Predicted Functional Partners:
XP_008451331.1
Uncharacterized protein LOC103492654 (187 aa)
           
  0.708
XP_008449435.1
Uncharacterized protein LOC103491325 (204 aa)
           
  0.708
XP_008465273.1
Probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 (584 aa)
           
  0.587
XP_008441411.1
Uncharacterized protein LOC103485537 (172 aa)
     
   
  0.575
XP_008466566.1
Uncharacterized protein LOC103503945 isoform X1 (304 aa)
           
  0.571
XP_008462176.1
Activating signal cointegrator 1 complex subunit 1 (513 aa)
           
  0.571
XP_008459745.1
Uncharacterized protein LOC103498788 (333 aa)
           
  0.571
XP_008454390.1
Lysine-specific demethylase JMJ25; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (936 aa)
           
  0.571
XP_008443588.1
Uncharacterized protein LOC103487144 (245 aa)
           
  0.571
XP_008456552.1
Uncharacterized protein LOC103496469; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (287 aa)
           
  0.569
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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