STRINGSTRING
XP_008437661.1 protein (Cucumis melo) - STRING interaction network
"XP_008437661.1" - Uncharacterized protein LOC103483001 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437661.1Uncharacterized protein LOC103483001 (295 aa)    
Predicted Functional Partners:
XP_008467019.1
E3 ubiquitin protein ligase RIE1 (356 aa)
           
  0.616
XP_008462033.1
Probable E3 ubiquitin-protein ligase XERICO; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (158 aa)
           
  0.559
XP_008462031.1
E3 ubiquitin-protein ligase ATL4-like isoform X1 (160 aa)
           
  0.559
XP_008448128.1
E3 ubiquitin-protein ligase ATL4-like (156 aa)
           
  0.559
XP_008461919.1
Anaphase-promoting complex subunit 11 (84 aa)
           
  0.546
XP_008438136.1
Cytochrome P450 704C1-like isoform X1 (515 aa)
           
  0.476
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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