STRINGSTRING
XP_008437670.1 protein (Cucumis melo) - STRING interaction network
"XP_008437670.1" - Uncharacterized protein LOC103483010 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437670.1Uncharacterized protein LOC103483010; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments (181 aa)    
Predicted Functional Partners:
XP_008459357.1
Probable prefoldin subunit 2 (148 aa)
     
 
  0.996
XP_008438968.1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (194 aa)
     
 
  0.995
XP_008450462.1
Prefoldin subunit 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns (128 aa)
     
 
  0.994
XP_008444032.1
Prefoldin subunit 6 (130 aa)
   
 
  0.994
XP_008456105.1
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (126 aa)
   
 
  0.993
XP_008439666.1
DNA-binding protein DDB_G0278111 (128 aa)
   
      0.890
XP_008452073.1
Small nuclear ribonucleoprotein Sm D2-like (107 aa)
     
   
  0.879
XP_008463776.1
Probable small nuclear ribonucleoprotein F (87 aa)
     
        0.866
XP_008462580.1
Probable small nuclear ribonucleoprotein G (80 aa)
     
        0.866
XP_008459030.1
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family (235 aa)
     
        0.866
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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