STRINGSTRING
XP_008437724.1 protein (Cucumis melo) - STRING interaction network
"XP_008437724.1" - Endoglucanase-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437724.1Endoglucanase-like (488 aa)    
Predicted Functional Partners:
XP_008445110.1
Endonuclease V isoform X1 (264 aa)
           
  0.728
XP_008441735.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (521 aa)
           
  0.701
XP_008440351.1
Probable prolyl 4-hydroxylase 9; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (293 aa)
           
  0.586
XP_008461801.1
Polygalacturonase-like (446 aa)
           
  0.562
XP_008453925.1
Prolyl 4-hydroxylase subunit alpha-1 isoform X1 (290 aa)
           
  0.560
XP_008458333.1
Peroxidase 40; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (332 aa)
           
  0.553
XP_008455235.1
beta-xylosidase/alpha-L-arabinofuranosidase 1-like (791 aa)
           
  0.545
XP_008458700.1
Prolyl 4-hydroxylase subunit alpha-2-like (316 aa)
           
  0.482
XP_008443446.1
Prolyl 4-hydroxylase subunit alpha-1-like (318 aa)
           
  0.482
XP_008441346.1
Mavicyanin-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (172 aa)
           
  0.426
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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