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XP_008437727.1 protein (Cucumis melo) - STRING interaction network
"XP_008437727.1" - HIPL1 protein-like isoform X1 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437727.1HIPL1 protein-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (696 aa)    
Predicted Functional Partners:
XP_008461080.1
WD repeat-containing protein 43; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (624 aa)
           
  0.836
XP_008442990.1
Uncharacterized protein LOC103486722; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (324 aa)
           
  0.836
XP_008443440.1
Beta-glucuronosyltransferase GlcAT14B; Xylosyltransferase 1-like (428 aa)
           
  0.727
XP_008453173.1
LRR receptor-like serine/threonine-protein kinase FEI 2 isoform X1 (600 aa)
           
  0.704
XP_008437655.1
LRR receptor-like serine/threonine-protein kinase FEI 2 (601 aa)
           
  0.704
XP_008458393.1
LOW QUALITY PROTEIN- WD repeat-containing protein 43; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (628 aa)
           
  0.627
XP_008440530.1
Putative U-box domain-containing protein 50 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (806 aa)
           
  0.605
XP_008453167.1
Uncharacterized protein LOC103493963 (1253 aa)
           
  0.587
XP_008453195.1
Transcription factor bHLH47; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (253 aa)
           
  0.570
XP_008440462.1
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 7 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (356 aa)
           
  0.561
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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