STRINGSTRING
XP_008437750.1 protein (Cucumis melo) - STRING interaction network
"XP_008437750.1" - Endoribonuclease Dicer homolog 1 in Cucumis melo
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437750.1Endoribonuclease Dicer homolog 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns; Belongs to the helicase family. Dicer subfamily (1990 aa)    
Predicted Functional Partners:
XP_008444916.1
Double-stranded RNA-binding protein 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (347 aa)
       
 
  0.993
XP_008451085.1
Serrate RNA effector molecule (751 aa)
     
 
  0.993
XP_008445459.1
Small RNA 2’-O-methyltransferase isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (948 aa)
       
 
  0.984
XP_008438929.1
Protein argonaute 1; Belongs to the argonaute family (1059 aa)
     
 
  0.983
XP_008453109.1
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1117 aa)
     
 
  0.978
XP_008452556.1
Protein DCL, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (225 aa)
           
  0.969
XP_008454522.1
FHA domain-containing protein DDL; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (353 aa)
     
 
  0.968
XP_008455642.1
Protein HASTY 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (1201 aa)
     
 
  0.962
XP_008446401.1
Protein argonaute 7; Belongs to the argonaute family (1019 aa)
     
 
  0.938
XP_008462248.1
Protein argonaute 5; Belongs to the argonaute family (983 aa)
     
 
  0.905
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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