STRINGSTRING
XP_008437772.1 protein (Cucumis melo) - STRING interaction network
"XP_008437772.1" - Protein mago nashi homolog in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437772.1Protein mago nashi homolog (152 aa)    
Predicted Functional Partners:
XP_008450386.1
RNA-binding protein 8A-B (197 aa)
     
  0.999
XP_008459659.1
Regulator of nonsense transcripts UPF3 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (513 aa)
     
  0.994
XP_008461865.1
Eukaryotic initiation factor 4A-3 (409 aa)
     
 
  0.993
XP_008455121.1
Partner of Y14 and mago isoform X1 (231 aa)
     
 
  0.987
XP_008445205.1
DEAD-box ATP-dependent RNA helicase 56 (427 aa)
     
 
  0.984
XP_008462580.1
Probable small nuclear ribonucleoprotein G (80 aa)
     
 
  0.965
XP_008448746.1
LOW QUALITY PROTEIN- regulator of nonsense transcripts 1 homolog; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1268 aa)
     
 
  0.965
XP_008457020.1
THO complex subunit 4D isoform X1 (285 aa)
     
 
  0.964
XP_008440274.1
Eukaryotic initiation factor 4A-I isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 13 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (211 aa)
     
 
  0.960
XP_008452073.1
Small nuclear ribonucleoprotein Sm D2-like (107 aa)
     
 
  0.955
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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