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XP_008437781.1 protein (Cucumis melo) - STRING interaction network
"XP_008437781.1" - LOW QUALITY PROTEIN: uncharacterized protein LOC103483113 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437781.1LOW QUALITY PROTEIN- uncharacterized protein LOC103483113; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 2 codons (1550 aa)    
Predicted Functional Partners:
XP_008455437.1
Uncharacterized protein LOC103495596 isoform X1 (884 aa)
     
 
  0.751
XP_008438212.1
Pentatricopeptide repeat-containing protein At3g03580 (895 aa)
           
  0.724
XP_008461521.1
Uncharacterized protein LOC103500093 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (1341 aa)
           
  0.723
XP_008458145.1
DExH-box ATP-dependent RNA helicase DExH9; Superkiller viralicidic activity 2-like 2 (994 aa)
     
 
  0.715
XP_008450745.1
DExH-box ATP-dependent RNA helicase DExH10; Superkiller viralicidic activity 2-like 2 (1014 aa)
     
 
  0.715
XP_008442002.1
Protein RRP6-like 2; Exosome component 10 (938 aa)
     
 
  0.696
XP_008462907.1
Polyadenylate-binding protein-interacting protein 12; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 8 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (403 aa)
     
 
  0.650
XP_008460141.1
UTP-RNA uridylyltransferase 1; Uncharacterized protein LOC103499041 (751 aa)
     
   
  0.638
XP_008461703.1
poly(A) RNA polymerase GLD2 isoform X1 (468 aa)
     
   
  0.615
XP_008445020.1
Exosome complex exonuclease RRP46 homolog (243 aa)
     
 
  0.604
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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