STRINGSTRING
XP_008437819.1 protein (Cucumis melo) - STRING interaction network
"XP_008437819.1" - Uncharacterized protein LOC103483134 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437819.1Uncharacterized protein LOC103483134; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (256 aa)    
Predicted Functional Partners:
XP_008462692.1
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 (1083 aa)
   
 
  0.736
XP_008438191.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (490 aa)
           
  0.707
XP_008439503.1
Subtilisin-like protease SBT2.3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns; Belongs to the peptidase S8 family (842 aa)
           
  0.699
XP_008439933.1
RING-type E3 ubiquitin transferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (365 aa)
           
  0.584
XP_008461908.1
Uncharacterized protein LOC103500400 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (311 aa)
   
   
  0.547
XP_008446340.1
Uncharacterized protein LOC103489109 isoform X1 (350 aa)
   
   
  0.547
XP_008444402.1
Uncharacterized protein LOC103487740 isoform X1 (304 aa)
   
   
  0.545
XP_008453488.1
Uncharacterized protein LOC103494188 isoform X1 (1372 aa)
         
  0.495
XP_008461461.1
Histidinol-phosphate aminotransferase, chloroplastic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (422 aa)
         
  0.442
XP_008437553.1
Uncharacterized protein LOC103482932; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (350 aa)
   
   
  0.417
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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