STRINGSTRING
XP_008437821.1 protein (Cucumis melo) - STRING interaction network
"XP_008437821.1" - Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437821.1Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic (260 aa)    
Predicted Functional Partners:
XP_008443511.1
Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic (447 aa)
     
 
  0.868
XP_008446250.1
Uncharacterized protein LOC103489037 (170 aa)
     
        0.814
XP_008455137.1
Peptidyl-prolyl cis-trans isomerase FKBP12 (112 aa)
   
     
  0.750
XP_008455988.1
Thylakoid lumenal 17.4 kDa protein, chloroplastic (237 aa)
     
   
  0.740
XP_008443474.1
Uncharacterized protein LOC103487059 (181 aa)
     
        0.733
XP_008440888.1
Thiol-disulfide oxidoreductase LTO1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (377 aa)
     
 
  0.728
XP_008460096.1
50S ribosomal protein L3, chloroplastic; Belongs to the universal ribosomal protein uL3 family (293 aa)
     
        0.723
XP_008448578.1
Neutral alpha-glucosidase C; Belongs to the glycosyl hydrolase 31 family (1060 aa)
     
   
  0.706
XP_008445125.1
psbP domain-containing protein 5, chloroplastic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (296 aa)
     
   
  0.682
XP_008452322.1
50S ribosomal protein L24, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL24 family (191 aa)
     
        0.682
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (7%) [HD]