STRINGSTRING
XP_008437822.1 protein (Cucumis melo) - STRING interaction network
"XP_008437822.1" - Protein ARABIDILLO 1-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437822.1Protein ARABIDILLO 1-like (948 aa)    
Predicted Functional Partners:
XP_008453295.1
Importin subunit alpha; Belongs to the importin alpha family (536 aa)
           
  0.628
XP_008461027.1
RING-type E3 ubiquitin transferase; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (387 aa)
           
  0.610
XP_008441024.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 27 (408 aa)
           
  0.610
XP_008452077.1
RING-type E3 ubiquitin transferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (756 aa)
           
  0.598
XP_008438926.1
Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial (694 aa)
     
   
  0.588
XP_008462517.1
Pentatricopeptide repeat-containing protein At5g03800 (905 aa)
           
  0.570
XP_008442644.1
Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (736 aa)
           
  0.570
XP_008441801.1
LOW QUALITY PROTEIN- eIF-2-alpha kinase activator GCN1; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 1 codon (2611 aa)
           
  0.570
XP_008436976.1
WD repeat-containing protein WRAP73 isoform X1 (454 aa)
 
            0.564
XP_008453701.1
Aspartic proteinase CDR1-like; Belongs to the peptidase A1 family (484 aa)
           
  0.480
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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