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XP_008437842.1 protein (Cucumis melo) - STRING interaction network
"XP_008437842.1" - Rho GTPase-activating protein 5 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437842.1Rho GTPase-activating protein 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (481 aa)    
Predicted Functional Partners:
XP_008453112.1
Rac-like GTP-binding protein ARAC8; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 11 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns; Belongs to the small GTPase superfamily. Rho family (210 aa)
       
 
  0.796
XP_008458444.1
Kinesin-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (806 aa)
           
  0.729
XP_008439020.1
DEAD-box ATP-dependent RNA helicase 50; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (648 aa)
       
 
  0.728
XP_008458233.1
Rop guanine nucleotide exchange factor 3 isoform X1 (473 aa)
           
  0.722
XP_008451640.1
LOW QUALITY PROTEIN- protein SPIRRIG; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons (3554 aa)
     
   
  0.669
XP_008450192.1
Receptor-like cytosolic serine/threonine-protein kinase RBK1 (466 aa)
       
 
  0.589
XP_008452791.1
LOW QUALITY PROTEIN- fatty-acid-binding protein 2; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (430 aa)
           
  0.581
XP_008463902.1
Interactor of constitutive active ROPs 3 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (600 aa)
           
  0.572
XP_008463458.1
Interactor of constitutive active ROPs 3-like (614 aa)
           
  0.572
XP_008449279.1
Interactor of constitutive active ROPs 2, chloroplastic (589 aa)
           
  0.572
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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