STRINGSTRING
XP_008437865.1 protein (Cucumis melo) - STRING interaction network
"XP_008437865.1" - ORM1-like protein 3 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437865.1ORM1-like protein 3 (157 aa)    
Predicted Functional Partners:
XP_008444597.1
Long chain base biosynthesis protein 1 isoform X1 (483 aa)
     
 
  0.957
XP_008464380.1
Long chain base biosynthesis protein 2a (490 aa)
     
 
  0.827
XP_008453153.1
Serine/threonine-protein kinase AtPK2/AtPK19-like (480 aa)
     
 
  0.670
XP_008466022.1
LAG1 longevity assurance homolog 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (308 aa)
       
 
  0.664
XP_008454946.1
LAG1 longevity assurance homolog 2 (289 aa)
       
 
  0.664
XP_008459255.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (435 aa)
       
 
  0.663
XP_008463094.1
Lecithin-cholesterol acyltransferase-like 1 (435 aa)
           
  0.627
XP_008459195.1
Dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (262 aa)
           
  0.621
XP_008437505.1
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial isoform X1 (502 aa)
     
 
  0.596
XP_008451591.1
DNA mismatch repair protein PMS1 (921 aa)
           
  0.591
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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