STRINGSTRING
XP_008437866.1 protein (Cucumis melo) - STRING interaction network
"XP_008437866.1" - Dof zinc finger protein DOF3.7-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437866.1Dof zinc finger protein DOF3.7-like (174 aa)    
Predicted Functional Partners:
XP_008462867.1
Homeobox protein BEL1 homolog isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (817 aa)
           
  0.611
XP_008457235.1
Purple acid phosphatase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (547 aa)
           
  0.581
XP_008453343.1
MADS-box protein CMB1-like isoform X1 (269 aa)
           
  0.550
XP_008445436.1
MADS-box protein CMB1; Truncated transcription factor CAULIFLOWER A (242 aa)
           
  0.550
XP_008437190.1
Agamous-like MADS-box protein AGL19 (223 aa)
           
  0.550
XP_008456886.1
Trihelix transcription factor PTL-like; Uncharacterized protein LOC103496697 (394 aa)
           
  0.544
XP_008456416.1
Transcription factor TCP4-like (320 aa)
           
  0.418
XP_008453304.1
Squamosa promoter-binding-like protein 6 (549 aa)
           
  0.418
XP_008453118.1
Squamosa promoter-binding-like protein 12 (548 aa)
           
  0.418
XP_008453284.1
Transcription factor TCP5 (415 aa)
           
  0.414
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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