STRINGSTRING
XP_008437869.1 protein (Cucumis melo) - STRING interaction network
"XP_008437869.1" - Uncharacterized protein LOC103483172 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437869.1Uncharacterized protein LOC103483172; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (103 aa)    
Predicted Functional Partners:
XP_008450779.1
Uncharacterized protein LOC103492259 (370 aa)
           
  0.931
XP_008440185.1
BTB/POZ domain-containing protein At5g66560; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns; Belongs to the NPH3 family (689 aa)
           
  0.855
XP_008441404.1
Protein NEDD1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (799 aa)
           
  0.750
XP_008466278.1
Gamma-glutamylcyclotransferase; Catalyzes the formation of 5-oxoproline from gamma- glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis (224 aa)
           
  0.703
XP_008457896.1
UPF0496 protein At2g18630-like isoform X1 (414 aa)
           
  0.697
XP_008447146.1
Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (206 aa)
           
  0.631
XP_008442765.1
dnaJ homolog subfamily C member 28 (224 aa)
           
  0.631
XP_008454966.1
Probable E3 ubiquitin ligase SUD1 (1098 aa)
           
  0.528
XP_008465935.1
Uncharacterized protein LOC103503506; Probable inactive serine/threonine-protein kinase fnkC isoform X1 (349 aa)
           
  0.422
XP_008458292.1
Uncharacterized protein LOC103497755; BTB/POZ and MATH domain-containing protein 3 (316 aa)
           
  0.422
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (5%) [HD]