STRINGSTRING
XP_008437902.1 protein (Cucumis melo) - STRING interaction network
"XP_008437902.1" - Putative RING-H2 finger protein ATL21A in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
XP_008437902.1Putative RING-H2 finger protein ATL21A (381 aa)    
Predicted Functional Partners:
XP_008458312.1
Probable protein phosphatase 2C 13; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (372 aa)
           
  0.836
XP_008460138.1
Receptor-like serine/threonine-protein kinase At2g45590; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (653 aa)
       
 
  0.791
XP_008439134.1
Receptor-like serine/threonine-protein kinase At4g25390 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (751 aa)
       
 
  0.791
XP_008466717.1
BTB/POZ domain-containing protein At1g21780 (329 aa)
     
   
  0.728
XP_008447790.1
BTB/POZ domain-containing protein At1g55760 (327 aa)
     
   
  0.728
XP_008441682.1
Guanosine nucleotide diphosphate dissociation inhibitor 2; Belongs to the Rab GDI family (444 aa)
           
  0.702
XP_008451374.1
DNA repair helicase XPD isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (758 aa)
           
  0.632
XP_008439153.1
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (316 aa)
           
  0.597
XP_008455112.1
L-galactose dehydrogenase (323 aa)
           
  0.582
XP_008448522.1
Receptor homology region, transmembrane domain- and RING domain-containing protein 5 (149 aa)
     
   
  0.490
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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