STRINGSTRING
XP_008437961.1 protein (Cucumis melo) - STRING interaction network
"XP_008437961.1" - Tubulin gamma chain in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437961.1Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)    
Predicted Functional Partners:
XP_008448998.1
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (707 aa)
     
 
  0.994
XP_008441751.1
Mitotic-spindle organizing protein 1A-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (71 aa)
       
 
  0.973
XP_008442226.1
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (846 aa)
     
 
  0.960
XP_008457080.1
Uncharacterized protein LOC103496848 (1222 aa)
     
 
  0.958
XP_008436995.1
Kinesin-like protein KIF22-B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (712 aa)
     
 
  0.929
XP_008465374.1
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (714 aa)
     
 
  0.927
XP_008450387.1
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (692 aa)
     
 
  0.927
XP_008446088.1
Mitotic spindle checkpoint protein MAD2 (208 aa)
     
 
  0.917
XP_008443426.1
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (351 aa)
     
        0.866
XP_008443431.1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (642 aa)
     
   
  0.861
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (6%) [HD]