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XP_008437980.1 protein (Cucumis melo) - STRING interaction network
"XP_008437980.1" - Reticulon-like protein in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437980.1Reticulon-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 18 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (255 aa)    
Predicted Functional Partners:
XP_008458041.1
GTP cyclohydrolase 1; Uncharacterized protein LOC103497585 (460 aa)
       
      0.713
XP_008449127.1
Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5; Vacuolar protein sorting-associated protein VTA1 homolog (428 aa)
       
      0.713
XP_008455076.1
Uncharacterized protein LOC103495340; Cylicin-1 (801 aa)
           
  0.566
XP_008451996.1
Probable membrane-associated kinase regulator 2 (448 aa)
           
  0.483
XP_008437349.1
Late embryogenesis abundant protein At1g64065; Uncharacterized protein LOC103482793 (209 aa)
           
  0.483
XP_008462355.1
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (817 aa)
       
 
  0.433
XP_008459077.1
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (900 aa)
       
 
  0.433
XP_008439302.1
dnaJ protein ERDJ2A; Translocation protein SEC63 homolog (684 aa)
           
  0.422
XP_008466334.1
Uncharacterized protein At2g24330; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (401 aa)
       
 
  0.411
XP_008451265.1
Guanylate-binding protein 4 (601 aa)
       
 
  0.409
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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