STRINGSTRING
XP_008437987.1 protein (Cucumis melo) - STRING interaction network
"XP_008437987.1" - Exocyst complex component SEC10 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437987.1Exocyst complex component SEC10 (838 aa)    
Predicted Functional Partners:
XP_008456686.1
Exocyst complex component SEC6 (756 aa)
     
 
  0.998
XP_008461938.1
Exocyst complex component SEC5A-like isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (1091 aa)
     
 
  0.994
XP_008462226.1
Exocyst complex component EXO84B (765 aa)
     
 
  0.973
XP_008456522.1
LOW QUALITY PROTEIN- exocyst complex component SEC8; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1073 aa)
     
   
  0.970
XP_008456138.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (789 aa)
     
 
  0.934
XP_008451659.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (699 aa)
     
 
  0.934
XP_008443223.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (789 aa)
     
 
  0.934
XP_008459057.1
Exocyst complex component EXO84C (773 aa)
     
 
  0.929
XP_008464783.1
Exocyst complex component EXO84A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (771 aa)
     
 
  0.929
XP_008447654.1
Exocyst complex component EXO84C-like (247 aa)
     
 
  0.928
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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