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XP_008437990.1 protein (Cucumis melo) - STRING interaction network
"XP_008437990.1" - Uncharacterized protein LOC103483245 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437990.1Uncharacterized protein LOC103483245; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (161 aa)    
Predicted Functional Partners:
XP_008444959.1
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (516 aa)
           
  0.568
XP_008448941.1
Copper chaperone for superoxide dismutase, chloroplastic/cytosolic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (328 aa)
       
 
  0.437
XP_008455264.1
Dynamin-like protein ARC5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (771 aa)
           
  0.422
XP_008450613.1
pre-mRNA-splicing factor SF2 (320 aa)
           
  0.422
XP_008464413.1
Heavy metal-associated isoprenylated plant protein 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (362 aa)
           
  0.420
XP_008464282.1
Leucine-rich repeat extensin-like protein 3 (299 aa)
           
  0.420
XP_008463438.1
Early nodulin-like protein 3 (210 aa)
           
  0.420
XP_008458557.1
RNA-binding protein cabeza-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (563 aa)
           
  0.420
XP_008454534.1
Early nodulin-like protein 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (244 aa)
           
  0.420
XP_008440982.1
Protein PXR1-like (238 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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