STRINGSTRING
XP_008438007.1 protein (Cucumis melo) - STRING interaction network
"XP_008438007.1" - Probable polygalacturonase in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438007.1Probable polygalacturonase (493 aa)    
Predicted Functional Partners:
XP_008457627.1
Probable polygalacturonase At1g80170 isoform X1; Belongs to the glycosyl hydrolase 28 family (231 aa)
   
     
  0.756
XP_008446748.1
Nudix hydrolase 26, chloroplastic; Belongs to the Nudix hydrolase family (194 aa)
           
  0.708
XP_008464649.1
Tetratricopeptide repeat protein 7B (708 aa)
           
  0.707
XP_008443193.1
GTP-binding protein TypA/BipA homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (680 aa)
           
  0.707
XP_008460394.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 9 (461 aa)
           
  0.612
XP_008441805.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 9-like (444 aa)
           
  0.612
XP_008443814.1
Glycine-rich protein DOT1-like; Uncharacterized protein AFUA_6G14090-like (136 aa)
           
  0.606
XP_008443813.1
Glycine-rich cell wall structural protein 2-like (152 aa)
           
  0.606
XP_008443812.1
Putative glycine-rich cell wall structural protein 1 (138 aa)
           
  0.606
XP_008465244.1
Probable pectinesterase 53 (375 aa)
           
  0.592
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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