STRINGSTRING
XP_008438012.1 protein (Cucumis melo) - STRING interaction network
"XP_008438012.1" - Myosin heavy chain kinase B in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438012.1Myosin heavy chain kinase B; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (384 aa)    
Predicted Functional Partners:
XP_008446308.1
Uncharacterized protein LOC103489082 (315 aa)
           
  0.855
XP_008451640.1
LOW QUALITY PROTEIN- protein SPIRRIG; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons (3554 aa)
     
 
  0.794
XP_008438653.1
Protein CDC73 homolog; Parafibromin (407 aa)
     
 
  0.754
XP_008450914.1
RNA polymerase-associated protein CTR9 homolog (1077 aa)
     
 
  0.745
XP_008448818.1
RNA polymerase-associated protein LEO1 (623 aa)
       
 
  0.744
XP_008462415.1
LOW QUALITY PROTEIN- protein PAF1 homolog; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (705 aa)
       
 
  0.655
XP_008458863.1
Protein FIZZY-RELATED 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (475 aa)
   
     
  0.621
XP_008437188.1
Protein FIZZY-RELATED 2 (503 aa)
   
     
  0.620
XP_008453040.1
Tetratricopeptide repeat protein SKI3; Uncharacterized protein LOC103493866 (1183 aa)
       
 
  0.618
XP_008453607.1
Uncharacterized protein LOC103494266 (645 aa)
     
   
  0.602
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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