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XP_008438019.1 protein (Cucumis melo) - STRING interaction network
"XP_008438019.1" - E3 ubiquitin-protein ligase At3g02290 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438019.1E3 ubiquitin-protein ligase At3g02290 isoform X1 (195 aa)    
Predicted Functional Partners:
XP_008449203.1
BAHD acyltransferase DCR-like (471 aa)
           
  0.607
XP_008442462.1
Uncharacterized acetyltransferase At3g50280 (485 aa)
           
  0.607
XP_008441438.1
LOW QUALITY PROTEIN- uncharacterized acetyltransferase At3g50280; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (497 aa)
           
  0.607
XP_008459453.1
Protein NSP-INTERACTING KINASE 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (626 aa)
           
  0.483
XP_008459284.1
Plastid division protein PDV2; Belongs to the globin family (474 aa)
           
  0.471
XP_008442217.1
ultraviolet-B receptor UVR8 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (419 aa)
       
 
  0.453
XP_008465081.1
RNA-binding protein FUS-like isoform X1 (286 aa)
           
  0.420
XP_008454508.1
RNA-binding protein FUS-like isoform X1 (286 aa)
           
  0.420
XP_008452578.1
Uncharacterized acetyltransferase At3g50280-like (459 aa)
           
  0.420
XP_008452577.1
LOW QUALITY PROTEIN- uncharacterized acetyltransferase At3g50280-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 1 codon (451 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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