STRINGSTRING
XP_008438061.1 protein (Cucumis melo) - STRING interaction network
"XP_008438061.1" - DEAD-box ATP-dependent RNA helicase 8 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
XP_008438061.1DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family (492 aa)    
Predicted Functional Partners:
XP_008466182.1
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (530 aa)
   
 
  0.994
XP_008467202.1
Protein decapping 5-like (604 aa)
     
 
  0.987
XP_008446539.1
Protein decapping 5 (589 aa)
     
 
  0.987
XP_008462598.1
mRNA-decapping enzyme-like protein (368 aa)
     
 
  0.973
XP_008443510.1
Uncharacterized protein LOC103487079 (188 aa)
     
 
  0.955
XP_008437787.1
CCR4-NOT transcription complex subunit 1 (2381 aa)
     
 
  0.955
XP_008465329.1
General negative regulator of transcription subunit 3 (904 aa)
     
 
  0.928
XP_008463873.1
Uncharacterized protein LOC103501902 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (1097 aa)
     
 
  0.901
XP_008453149.1
Uncharacterized protein LOC103493947 (349 aa)
 
 
 
  0.901
XP_008464008.1
Polyadenylate-binding protein-interacting protein 3 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (632 aa)
     
 
  0.890
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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